miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|112353454|gb|AM389683.1|AM389683 TTCTAAAAAAAANNNGNTTAATCTATACTCTTCAACAATGTCATCATCATCATCATCTTACTTGAGAGATGAAGATCTGA
CACAAGAAACAAGAGATCTGATCTCTTCTCTTCCAAGCAAGAAAGGTTGGTTGGTGAGCCAAATGTATCAGTTTCAAGGA
CGTTGGCACACACAAGCCCTCTTACAAGGACTCTTGCAATACCAAAAACACTTTGAGGCCAAAGATTCCGACATTATCCT
CGTCACCAATCCTAAATCAGGTACCACTTGGTTAAAAGCTCTTGTCTTTTCTCTCATTAACCGACACAAGTTTCCAGTTT
CTTCTGGTGATCATCCTCTTCTTGTTACCAATCCGCACCTTCTCATACCCTTCTTGGAAGGAGTTTACTACGAGTCTCCA
AATTTCGATTTCACTGAGTTGCCTTCTCCAAGACTCATGAACACACACATATCGCTTCTTTCCCTGCCCGNNNCCGTTAN
GAGCTCCTCTTGTA




Most similar to sp|P52839|FSTL_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P52839|FSTL_ARATH Flavonol sulfotransferase-like OS=Arabidopsis
           thaliana GN=At2g03760 PE=1 SV=2
          Length = 326

 Score =  248 bits (634), Expect = 1e-65
 Identities = 121/146 (82%), Positives = 133/146 (91%), Gaps = 1/146 (0%)
 Frame = +2

Query: 59  YLRDEDLTQETRDLISSLPSKKGWLVSQMYQFQGRWHTQALLQGLLQYQKHFEAKDSDII 238
           YL DEDLTQETR LISSLP +KGWLVS++Y+FQG WHTQA+LQG+L  QK FEAKDSDII
Sbjct: 10  YLGDEDLTQETRALISSLPKEKGWLVSEIYEFQGLWHTQAILQGILICQKRFEAKDSDII 69

Query: 239 LVTNPKSGTTWLKALVFSLINRHKFPV-SSGDHPLLVTNPHLLIPFLEGVYYESPNFDFT 415
           LVTNPKSGTTWLKALVF+L+NRHKFPV SSG+HPLLVTNPHLL+PFLEGVYYESP+FDF+
Sbjct: 70  LVTNPKSGTTWLKALVFALLNRHKFPVSSSGNHPLLVTNPHLLVPFLEGVYYESPDFDFS 129

Query: 416 ELPSPRLMNTHISLLSLPXXVXSSSC 493
            LPSPRLMNTHIS LSLP  V SSSC
Sbjct: 130 SLPSPRLMNTHISHLSLPESVKSSSC 155